Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
asnCRegulatory protein AsnC. (153 aa)    
Predicted Functional Partners:
plu4153
HTH asnC-type domain-containing protein; Truncated gene. Similar to C terminal region of unknown protein of Photorhabdus luminescens.
  
     0.773
plu3860
HTH asnC-type domain-containing protein; Unnamed protein product; Highly similar to transcriptional regulator AsnC-family YbaO of Escherichia coli.
  
     0.767
asnA
Aspartate--ammonia ligase (Asparagine synthetase A).
 
     0.617
mioC
Protein mioC, involved in modulation of initiation at oriC, initiation of chromosome replication.
  
    0.561
putA
Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family.
     
 0.495
gltB
Glutamate synthase [NADPH] large chain precursor (glutamate synthase alpha subunit) (NADPH-GOGAT) (GLTS alpha chain).
     
 0.439
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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