STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
asnAAspartate--ammonia ligase (Asparagine synthetase A). (330 aa)    
Predicted Functional Partners:
plu2770
Glutamine amidotransferase type-2 domain-containing protein; Unnamed protein product; Similar to asparagine synthetase B AsnB of Escherichia coli.
   
 
 0.917
plu4567
Argininosuccinate synthase; Unnamed protein product; Similar to argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
   
 
  0.902
argG
Argininosuccinate synthase (citrulline-aspartate ligase); Belongs to the argininosuccinate synthase family. Type 1 subfamily.
   
 
  0.902
pyrB
Aspartate carbamoyltransferase catalytic chain (aspartate transcarbamylase) (ATCase); Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
     
 0.901
purA1
Adenylosuccinate synthetase 1; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
    
  0.900
ansB
L-asparaginase II precursor (L-asparagine amidohydrolase II) (L-asnase II) (colaspase); Belongs to the asparaginase 1 family.
     
  0.900
aspC
Aspartate aminotransferase (transaminase A).
     
  0.900
ansA
L-asparaginase I (L-asparagine amidohydrolase I) (L-asnase I).
     
 0.900
nadB
L-aspartate oxidase (quinolinate synthetase B); Catalyzes the oxidation of L-aspartate to iminoaspartate.
     
  0.900
aspA
Aspartate ammonia-lyase (Aspartase).
     
  0.900
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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