STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu0102Unnamed protein product; Similar to two-component sensor kinase. (454 aa)    
Predicted Functional Partners:
plu0103
Unnamed protein product; Similar to two-component response regulator.
 
 
 0.855
bvgS
Virulence sensor protein BvgS precursor.
 
 
0.841
arcB
Aerobic respiration control sensor protein.
 
 
0.818
barA
Sensor protein BarA.
 
 
0.733
plu1233
Unnamed protein product; Similar to C-terminal region of formate hydrogenlyase transcriptional activator.
 
 0.722
rcsC
Sensor protein (capsular synthesis regulator component C); Component of the Rcs signaling system, which controls transcription of numerous genes. RcsC functions as a membrane- associated protein kinase that phosphorylates RcsD in response to environmental signals. The phosphoryl group is then transferred to the response regulator RcsB.
 
 
0.674
cpmI
Similar to CarF, protein involved in resistance to carbapenem.
  
    0.669
hnr
Hnr protein; Regulates the turnover of the sigma S factor (RpoS) by promoting its proteolysis in exponentially growing cells. Acts by binding and delivering RpoS to the ClpXP protease. RssB is not co- degraded with RpoS, but is released from the complex and can initiate a new cycle of RpoS recognition and degradation.
 
 
 0.661
flgD
Basal-body rod modification protein FlgD (flagellar protein for the initiation of hook assembly); Required for flagellar hook formation. May act as a scaffolding protein.
   
    0.644
plu0104
Unnamed protein product; Similar to putative secreted protein.
 
   
 0.637
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.