Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
pulAAlpha-dextrin endo-1,6-alpha-glucosidase precursor (pullulanase precursor); Belongs to the glycosyl hydrolase 13 family. (1090 aa)    
Predicted Functional Partners:
malQ
4-alpha-glucanotransferase (amylomaltase).
 
 
 0.987
malP
Maltodextrin phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
 
 
 0.986
pgm
Phosphoglucomutase.
 
  
 0.947
galU
UTP--glucose-1-phosphate uridylyltransferase (UDP-glucose pyrophosphorylase) (UDPGP).
     
 0.914
glpE
Thiosulfate sulfurtransferase GlpE; Catalyzes, although with low efficiency, the sulfur transfer reaction from thiosulfate to cyanide.
     
  0.900
plu0241
Unnamed protein product; Similar to putative YihX of Escherichia coli.
     
  0.800
treC
Trehalose-6-phosphate hydrolase (alpha,alpha-phosphotrehalase).
 
  
 0.676
argS
Arginyl-tRNA synthetase (Arginine-tRNA ligase).
  
   
 0.557
prtA
Alkaline metalloprotease precursor PrtA; Belongs to the peptidase M10B family.
      
 0.527
plu1382
Neutral metalloproteinase; Extracellular zinc metalloprotease.
      
 0.527
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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