STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu0131Unnamed protein product; Similar to H repeat-associated protein YhhI (b3484), YdcC (b1460) and Ybfl (b0705) of Escherichia coli. (376 aa)    
Predicted Functional Partners:
plu0132
Unnamed protein product; Hypothetical protein.
       0.714
plu0133
MPN domain-containing protein; Unnamed protein product; Highly similar putative radC-like protein YkfG of Escherichia coli; Belongs to the UPF0758 family.
       0.461
plu0130
Unnamed protein product; Hypothetical protein.
       0.435
plu0134
Unnamed protein product; Similar to unknown protein YafW of Escherichia coli.
       0.407
ISPlu9K
Transposase, IS4 family.
  
     0.405
ISPlu9J
Transposase, IS4 family.
  
     0.405
ISPlu9I
Similar to N terminal part of unknown protein.
  
     0.405
ISPlu9H
Transposase, IS4 Familly; Truncated gene. Similar to peptide synthetase.
  
     0.405
ISPlu9G
Transposase, IS4 family.
  
     0.405
ISPlu9F
Transposase, IS4 Familly.
  
     0.405
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.