Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
plu0156BAAT_C domain-containing protein; Unnamed protein product; Unknown protein. (312 aa)    
Predicted Functional Partners:
plu3513
Unnamed protein product; Some similarities with heme receptor HasR.
  
     0.626
plu0228
PMT_2 domain-containing protein; Truncated gene. Some similarities with binding protein component of ABC transporter.
  
     0.605
plu2031
Unnamed protein product; Similar to unknown protein.
  
     0.591
plu4257
DUF3327 domain-containing protein; Unnamed protein product; Some similarities with enterochelin esterase Fes (ferric enterobactin esterase). Putative secreted protein.
  
     0.586
plu0155
ENDO3c domain-containing protein; Unnamed protein product; Some similarities with the C-terminal region of 3-methyladenine DNA glycosylase.
       0.540
plu2715
Unnamed protein product; Similar to outer membrane siderophore receptor CjrC of Escherichia coli O164.
  
     0.532
plu3814
MFS domain-containing protein; Unnamed protein product; Similar to unknown protein.
  
     0.531
plu3577
DUF637 domain-containing protein; Unnamed protein product; Some similarities with hemagglutinin/hemolysin-related proteins. Putative transmembrane protein.
  
     0.526
plu3926
Unnamed protein product; Some similarities with ribonuclease; Belongs to the RNase T2 family.
  
     0.514
hemR
Hemin receptor precursor protein HemR.
  
     0.466
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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