Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
plu0159FA_desaturase domain-containing protein; Unnamed protein product; Some similarities with unknown protein. (336 aa)    
Predicted Functional Partners:
plu0158
Unnamed protein product; Similar to L-arginine:lysine amidinotransferase and similar to L-arginine:glycine amidinotransferase.
 
     0.826
plu3001
Uncharacterized protein; Truncated gene. Some similarities with unknown protein YnfI precursor of Escherichia coli.
  
     0.707
plu2321
Unnamed protein product; Similar to protein HMWP1 of Yersinia enterocolitica.
 
 
 0.694
plu0735
Unnamed protein product; Similar to unknown protein.
  
     0.672
plu0736
Unnamed protein product; Weakly similar to hypothetical proteins.
  
     0.663
plu0737
Unnamed protein product; Similar to unknown protein.
  
     0.659
plu0734
Unnamed protein product; Similar to unknown protein.
  
     0.657
plu0732
Unnamed protein product; Similar to unknown protein.
  
     0.652
plu3528
TauD domain-containing protein; Unnamed protein product; Some similarities with putative oxygenase and clavaminate synthase 1.
  
     0.638
plu4187
Unnamed protein product; Some similarities with cyclase/dehydrase/aromatase.
  
     0.628
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.