STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uxaCUronate isomerase (glucuronate isomerase) (uronic isomerase). (474 aa)    
Predicted Functional Partners:
uxuB
D-mannonate oxidoreductase (fructuronate reductase); Belongs to the mannitol dehydrogenase family.
 
 
 0.975
uxuA
Mannonate dehydratase (D-mannonate hydrolase); Catalyzes the dehydration of D-mannonate; Belongs to the mannonate dehydratase family.
 
  
 0.968
plu3934
Unnamed protein product; Highly similar to unknown protein of Photorhabdus luminescens and some similarities with the central region of beta-xylosidase.
  
  
  0.832
plu3935
Unnamed protein product; Highly similar to unknown protein of Photorhabdus luminescens and some similarities with the central region of beta-xylosidase.
  
  
  0.832
eda
KHG/KDPG aldolase [Includes: 4-hydroxy-2-oxoglutarate ldolase (2-keto-4-hydroxyglutarate aldolase) (KHG-aldolase); 2-dehydro-3-deoxyphosphogluconate aldolase (Phospho-2-dehydro-3-deoxygluconate aldolase) (Phospho-2-keto-3-deoxygluconate aldolase) (2-keto-3-deoxy-6-phosphogluconate aldolase) (KDPG-aldolase)].
 
   
 0.738
plu0173
Unnamed protein product; Similar to dicarboxylate transport system (permease small protein) and to unknown protein YiaM of Escherichia coli.
 
  
 0.553
kdgK
2-dehydro-3-deoxygluconokinase (2-keto-3-deoxygluconokinase) (3-deoxy-2-OXO-D-gluconate kinase) (KDG kinase).
 
   
 0.542
plu0172
Unnamed protein product; Similar to dicarboxylate-binding periplasmic protein and to unknown protein YiaO of Escherichia coli.
 
   
 0.530
plu0174
DctM domain-containing protein; Unnamed protein product; Similar to dicarboxylate transport system (permease large protein) and to unknown protein YiaN of Escherichia coli.
 
  
 0.479
plu2272
Unnamed protein product; Similar to glucosylceramidase; Belongs to the glycosyl hydrolase 30 family.
  
     0.457
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.