STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
kdgK2-dehydro-3-deoxygluconokinase (2-keto-3-deoxygluconokinase) (3-deoxy-2-OXO-D-gluconate kinase) (KDG kinase). (314 aa)    
Predicted Functional Partners:
eda
KHG/KDPG aldolase [Includes: 4-hydroxy-2-oxoglutarate ldolase (2-keto-4-hydroxyglutarate aldolase) (KHG-aldolase); 2-dehydro-3-deoxyphosphogluconate aldolase (Phospho-2-dehydro-3-deoxygluconate aldolase) (Phospho-2-keto-3-deoxygluconate aldolase) (2-keto-3-deoxy-6-phosphogluconate aldolase) (KDPG-aldolase)].
 
 
 0.977
uxuA
Mannonate dehydratase (D-mannonate hydrolase); Catalyzes the dehydration of D-mannonate; Belongs to the mannonate dehydratase family.
 
  
 0.935
rpe
Ribulose-phosphate 3-epimerase (pentose-5-phosphate 3-epimerase) (PPE) (R5P3E).
  
 0.832
plu3741
Unnamed protein product; Similar to L-ribulokinase AraB.
     
 0.807
uxaC
Uronate isomerase (glucuronate isomerase) (uronic isomerase).
 
   
 0.630
uxuB
D-mannonate oxidoreductase (fructuronate reductase); Belongs to the mannitol dehydrogenase family.
 
   
 0.626
nagB
Glucosamine-6-phosphate isomerase (glucosamine6-phosphate deaminase) (GNPDA) (GLCN6P deaminase); Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.
  
  
 0.423
hisA2
Unnamed protein product; Similar to phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase.
  
    0.421
hisA
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase.
  
    0.421
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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