STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu0219Unnamed protein product; Highly similar to binding protein component of ABC transporter; Belongs to the bacterial solute-binding protein 3 family. (278 aa)    
Predicted Functional Partners:
plu0220
ABC transmembrane type-1 domain-containing protein; Unnamed protein product; Highly similar to amino acid permease component of ABC transporter.
 
 0.957
plu0221
ABC transmembrane type-1 domain-containing protein; Unnamed protein product; Highly similar to amino acid permease component of ABC transporter.
 
 0.911
plu4485
ABC transmembrane type-1 domain-containing protein; Unnamed protein product; Similar to amino acid ABC transporter (permease).
 
 0.852
gltL
Glutamate/aspartate transport ATP-binding protein GltL.
 
 0.838
gltK
Glutamate/aspartate transport system permease protein GltK.
 
 0.831
gltJ
Glutamate/aspartate transport system permease protein GltJ.
 
 
 0.827
plu4486
Unnamed protein product; Similar to amino acid ABC transporter (ATP-binding protein).
 
 0.795
artQ
Arginine transport system permease protein artQ.
 
 
 0.793
artM
Arginine transport system permease protein artM.
 
  
 0.765
artP
Arginine transport ATP-binding protein ArtP.
  
 0.704
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.