Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
plu0228PMT_2 domain-containing protein; Truncated gene. Some similarities with binding protein component of ABC transporter. (487 aa)    
Predicted Functional Partners:
plu0510
Unnamed protein product; Similar to unknown protein.
  
     0.755
plu0508
Unnamed protein product; Similar to unknown protein. Putative secreted protein.
  
     0.747
plu3814
MFS domain-containing protein; Unnamed protein product; Similar to unknown protein.
  
     0.713
plu2715
Unnamed protein product; Similar to outer membrane siderophore receptor CjrC of Escherichia coli O164.
  
     0.695
plu0225
Haemagg_act domain-containing protein; Unnamed protein product; Some similarities with hemagglutinin/hemolysin-related protein. Putative transmembrane protein.
 
     0.690
plu3577
DUF637 domain-containing protein; Unnamed protein product; Some similarities with hemagglutinin/hemolysin-related proteins. Putative transmembrane protein.
  
     0.674
fepE
Ferric enterobactin transport protein.
  
     0.667
plu3926
Unnamed protein product; Some similarities with ribonuclease; Belongs to the RNase T2 family.
  
     0.664
plu2230
Metallophos domain-containing protein; Unnamed protein product; Some similarities with unknown protein.
  
     0.650
plu2718
Cofac_haem_bdg domain-containing protein; Unnamed protein product; Similar to unknown protein CjrA of Escherichia coli O164.
  
     0.635
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
Server load: medium (68%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.