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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glnLNitrogen regulation protein. (349 aa)    
Predicted Functional Partners:
glnG
Nitrogen regulation protein; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes.
 0.996
glnB
Nitrogen regulatory protein P-II.1; Belongs to the P(II) protein family.
  
 0.985
amtB
Probable ammonium transport protein AmtB.
 
 
 0.798
glnK
Nitrogen regulatory protein P-II 2; Belongs to the P(II) protein family.
  
 
 0.761
glnA
Glutamine synthetase (glutamate--ammonia ligase).
  
  
 0.759
arcB
Aerobic respiration control sensor protein.
 
 
 
 0.719
bvgS
Virulence sensor protein BvgS precursor.
 
 
 
 0.674
plu3311
Unnamed protein product; Highly similar to putative 2-component transcriptional regulator YfhA of Escherichia coli.
 
 0.631
plu3798
Sigma-54 factor interaction domain-containing protein; Unnamed protein product; Similar to the central region of response regulator of AtoC, ornithine/arginine decarboxylase inhibitor (ornithine decarboxylase antizyme).
 
 
 0.607
rpoN
RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
   
 0.583
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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