Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
plu0398UPF0270 protein plu0398; Unnamed protein product; Highly similar to unknown protein YheU of Escherichia coli; Belongs to the UPF0270 family. (72 aa)    
Predicted Functional Partners:
prkB
Phosphoribulokinase.
       0.837
plu0399
AB hydrolase-1 domain-containing protein; Unnamed protein product; Highly similar to unknown protein YheT of Escherichia coli.
       0.836
ISPlu6L
Transposase, IS982 family.
       0.543
ttk
Ttk protein; Required for nucleoid occlusion (NO) phenomenon, which prevents Z-ring formation and cell division over the nucleoid. Acts as a DNA-associated cell division inhibitor that binds simultaneously chromosomal DNA and FtsZ, and disrupts the assembly of FtsZ polymers. SlmA-DNA-binding sequences (SBS) are dispersed on non-Ter regions of the chromosome, preventing FtsZ polymerization at these regions.
 
     0.492
thiI
tRNA sulfurtransferase; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.
  
     0.460
plu0401
Unnamed protein product; Similar to unknown protein YfiK of Escherichia coli.
       0.410
plu2870
Unnamed protein product; Highly similar to 37 kDa nucleoid-associated protein YejK of Escherichia coli.
  
     0.407
plu0421
Unnamed protein product; Highly similar to unknown protein. Putative secreted protein.
 
     0.403
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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