Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
plu0411FKBP_N domain-containing protein; Unnamed protein product; Weakly similar to macrophage infectivity potentiator. (420 aa)    
Predicted Functional Partners:
plu0412
Unnamed protein product; Unknown protein.
       0.773
plu0413
Unnamed protein product; Similar to fimbrial protein MrpH of Proteus mirabilis.
       0.773
ftsX
Cell division protein; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
   
 
 0.686
plu0414
Unnamed protein product; Similar to fimbrial protein MrpG of Proteus mirabilis, a putative minor subunit of the MR/P fimbria, functions as an adhesin responsible for hemagglutination.
       0.639
ftsE
Cell division ATP-binding protein; Part of the ABC transporter FtsEX involved in cellular division.
   
 
 0.627
plu0415
Unnamed protein product; Similar to periplasmic fimbrial chaperone precursor MrpD of Proteus mirabilis.
       0.561
bepA
Beta-barrel assembly-enhancing protease; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state.
   
   0.499
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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