Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
plu0418Fimbrial domain-containing protein; Unnamed protein product; Similar to major structural subunit MrpA of Proteus mirabilis. (188 aa)    
Predicted Functional Partners:
plu0416
Unnamed protein product; Similar to outer membrane usher protein precursor.
 
   0.921
plu0415
Unnamed protein product; Similar to periplasmic fimbrial chaperone precursor MrpD of Proteus mirabilis.
 
 
 0.882
mrfC
Outer membrane usher protein MrfC.
 
   0.848
mrfD
MrfD protein; Highly similar to periplasmic fimbrial chaperone precursor MrpD of Proteus mirabilis.
  
 
 0.844
rof
Rof protein.
  
     0.733
plu0783
Unnamed protein product; Similar to putative fimbrial chaperone.
  
   0.725
plu2146
DctA-YdbH domain-containing protein; Unnamed protein product; Similar to membrane protein YdbH of Escherichia coli.
  
     0.717
plu0268
Unnamed protein product; Similar to outer membrane usher protein precursor.
 
   0.704
smp
Protein Smp precursor.
  
     0.700
plu0791
Unnamed protein product; Similar to outer membrane usher protein precursor.
 
   0.699
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.