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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu0419Recombinase, Type 1 fimbriae regulatory protein. (190 aa)    
Predicted Functional Partners:
plu0543
Phage_integrase domain-containing protein; Unnamed protein product; Similar to integrase/recombinase; Belongs to the 'phage' integrase family.
  
     0.774
plu1125
Unnamed protein product; Similar to integrase/recombinase; Belongs to the 'phage' integrase family.
  
     0.774
plu1135
Unnamed protein product; Similar to integrase/recombinase.
  
     0.774
plu1143
Unnamed protein product; Similar to integrase/recombinase.
  
     0.774
plu1359
Phage_integrase domain-containing protein; Truncated gene. Some similarities with C-terminal region of DNA primase; Belongs to the 'phage' integrase family.
  
     0.774
plu3579
Unnamed protein product; Similar to integrase/recombinase; Belongs to the 'phage' integrase family.
  
     0.774
plu3588
Unnamed protein product; Similar to integrase/recombinase.
  
     0.774
plu3688
Unnamed protein product; Similar to integrase/recombinase.
  
     0.774
plu3696
Unnamed protein product; Similar to integrase/recombinase; Belongs to the 'phage' integrase family.
  
     0.774
plu3704
Unnamed protein product; Similar to integrase/recombinase.
  
     0.774
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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