STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu0502Probable alginate O-acetylase; Unnamed protein product; Similar to putative alginate O-acetylation protein AlgI and putative polysaccharide modification protein; Belongs to the membrane-bound acyltransferase family. (473 aa)    
Predicted Functional Partners:
plu0500
Lipase_GDSL domain-containing protein; Unnamed protein product; Similar to probable periplasmic protein.
     0.942
plu0501
Unnamed protein product; Similar to putative periplasmic protein.
 
     0.910
plu2321
Unnamed protein product; Similar to protein HMWP1 of Yersinia enterocolitica.
 
 
 0.804
dltD
DltD protein for D-alanine esterification of lipoteichoic acid and wall teichoic acid.
 
  
 0.781
plu1878
Carrier domain-containing protein; Unnamed protein product; Similar to antibiotic synthetase.
 
 
 0.740
plu2642
Carrier domain-containing protein; Unnamed protein product; Similar to proteins involved in antibiotic biosynthesis. Putative transmembrane protein.
 
 
 0.719
plu3532
Unnamed protein product; Similar to proteins involved in antibiotics biosynthesis (NosC, tyrocidine synthetase III, gramicidin S synthetase II...).
 
 
 0.699
plu3533
Carrier domain-containing protein; Unnamed protein product; Similar to proteins involved in antibiotics biosynthesis (NosC, gramidin S synthetase II, tyrocidine synthetase III...); Belongs to the ATP-dependent AMP-binding enzyme family.
 
 
 0.699
plu1880
Unnamed protein product; Similar to proteins involved in antibiotic biosynthesis. Putative transmembrane protein.
 
  
 0.555
plu3923
Condensation domain-containing protein; Unnamed protein product; Weakly similar to synthetases (pyoverdine synthetase B, actinomycin synthetase II AcmB, mycosubtilin synthetase chain MycB...).
 
  
 0.551
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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