STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu0506Unnamed protein product; Similar to putative chaperone. (232 aa)    
Predicted Functional Partners:
plu0505
Unnamed protein product; Similar to outer membrane usher protein precursor.
 
   0.955
plu0268
Unnamed protein product; Similar to outer membrane usher protein precursor.
  
   0.854
plu0784
Unnamed protein product; Similar to outer membrane usher protein precursor.
  
   0.854
plu0791
Unnamed protein product; Similar to outer membrane usher protein precursor.
  
   0.854
phfD
PhfD protein; Similar to outer membrane usher protein precursor.
  
   0.854
plu2157
Unnamed protein product; Similar to hypothetical outer membrane usher protein YraJ precursor of Escherichia coli.
  
   0.854
mrfC
Outer membrane usher protein MrfC.
  
   0.850
plu0416
Unnamed protein product; Similar to outer membrane usher protein precursor.
  
   0.849
plu2159
Unnamed protein product; Similar to fimbrial subunit type 1 precursor.
 
 
 0.846
plu2156
Unnamed protein product; Similar to fimbrial adhesin precursor.
 
 
 0.839
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.