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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu0508Unnamed protein product; Similar to unknown protein. Putative secreted protein. (373 aa)    
Predicted Functional Partners:
plu0509
Bac_surface_Ag domain-containing protein; Unnamed protein product; Similar to hypothetical protein with three candidate membrane-spanning segments.
 
     0.950
plu0510
Unnamed protein product; Similar to unknown protein.
 
     0.799
plu0228
PMT_2 domain-containing protein; Truncated gene. Some similarities with binding protein component of ABC transporter.
  
     0.747
plu2715
Unnamed protein product; Similar to outer membrane siderophore receptor CjrC of Escherichia coli O164.
  
     0.689
phlA
Hemolysin PhlA.
  
     0.618
plu2718
Cofac_haem_bdg domain-containing protein; Unnamed protein product; Similar to unknown protein CjrA of Escherichia coli O164.
  
     0.607
hipB
HipB protein.
  
     0.581
phlB
PhlA hemolysin secretion/activation protein PhlB.
  
     0.570
plu2637
Unnamed protein product; Hypothetical transmembrane protein.
  
     0.566
plu3577
DUF637 domain-containing protein; Unnamed protein product; Some similarities with hemagglutinin/hemolysin-related proteins. Putative transmembrane protein.
  
     0.522
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.