Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tcaZHighly similar to insecticidal toxin complex protein TcaZ of W14. (530 aa)    
Predicted Functional Partners:
tccB1
Highly similar to insecticidal toxin complex protein TccB of W14 Putative transmembrane protein.
      
 0.540
tccA1
Highly similar to insecticidal toxin complex protein TccA of W14.
      
 0.540
tcaC
Highly similar to insecticidal toxin complex protein TcaC of W14.
      
 0.539
tccC3
Insecticidal toxin complex protein TccC3.
      
 0.538
tccA3
Insecticidal toxin complex protein TccA3.
      
 0.535
tccB3
Insecticidal toxin complex protein TccB3.
      
 0.535
tcdA5
Insecticidal toxin complex protein TcdA5.
      
 0.535
tcdA2
Insecticidal toxin complex protein TcdA2.
      
 0.534
plu1864
Unnamed protein product; Truncated gene. Some similarities with putative phosphoenolpyruvate phosphomutase.
      
 0.534
plu2809
JmjC domain-containing protein; Unnamed protein product; Highly similar to unknown protein YcfD of Escherichia coli.
      
 0.534
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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