STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu0571Unnamed protein product; Similar to putative AAA-family ATPase gene. (368 aa)    
Predicted Functional Partners:
plu0554
Unnamed protein product; Similar to ABC transporter, ATP-binding protein.
  
     0.749
plu4145
Unnamed protein product; Some similarities with ABC-type transport protein (IM-ABC type).
  
 
  0.727
lolD
Lipoprotein releasing system ATP-binding protein lolD; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.
  
     0.714
plu2735
Unnamed protein product; Similar to ABC transporter (ATP-binding protein subunit).
  
     0.706
ybbA
Probable ABC transporter ATP-binding protein YbbA.
  
     0.702
thiQ
Thiamine import ATP-binding protein ThiQ; Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Thiamine importer (TC 3.A.1.19.1) family.
  
     0.700
plu2648
Unnamed protein product; Highly similar to ATP-binding component of ABC transporter.
  
     0.700
plu2742
Unnamed protein product; Similar to ABC transporter, ATP-binding protein and permease.
  
 
  0.694
plu1467
Unnamed protein product; Some similarities with ABC-type transport proteins.
  
   0.693
plu2469
ABC transporter domain-containing protein; Unnamed protein product; Similar to N-terminal region of ATP-binding component of ABC transporter.
  
   0.679
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.