STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu0668UPF0325 protein plu0668; Unnamed protein product; Highly similar to putative structural protein YaeH of Escherichia coli; Belongs to the UPF0325 family. (128 aa)    
Predicted Functional Partners:
plu4557
Unnamed protein product; Highly similar to unknown protein YtfK of Escherichia coli.
  
   
 0.727
lpp
Major outer membrane lipoprotein precursor (murein-lipoprotein); A highly abundant outer membrane lipoprotein that controls the distance between the inner and outer membranes. The only protein known to be covalently linked to the peptidoglycan network (PGN). Also non-covalently binds the PGN. The link between the cell outer membrane and PGN contributes to maintenance of the structural and functional integrity of the cell envelope, and maintains the correct distance between the PGN and the outer membrane.
  
     0.723
plu3872
Unnamed protein product; Similar to putative lipoprotein YajG precursor of Escherichia coli.
  
     0.675
viaA
Unnamed protein product; Similar to unknown protein YieM of Escherichia coli.
  
     0.652
wzyE
Putative ECA polymerase; Probably involved in the polymerization of enterobacterial common antigen (ECA) trisaccharide repeat units; Belongs to the WzyE family.
  
     0.627
hns
DNA-binding protein H-NS (histone-like protein HLP-II).
  
    0.624
plu2843
UPF0265 protein plu2843; Unnamed protein product; Highly similar to putative alpha helix protein, YeeX protein of Escherichia coli; Belongs to the UPF0265 family.
  
     0.618
cyaA
Adenylate cyclase (ATP pyrophosphate-lyase) (adenylyl cyclase); Belongs to the adenylyl cyclase class-1 family.
  
     0.618
plu3826
Unnamed protein product; Similar to putative ligase YbaP of Escherichia coli.
  
     0.616
wecF
4-alpha-L-fucosyltransferase (TDP-Fuc4NAc:lipid II Fuc4NAc transferase) (Fuc4NAc transferase); Catalyzes the synthesis of Und-PP-GlcNAc-ManNAcA-Fuc4NAc (Lipid III), the third lipid-linked intermediate involved in ECA synthesis; Belongs to the glycosyltransferase 56 family.
  
     0.598
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.