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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu0726Unnamed protein product; Hypothetical protein. (130 aa)    
Predicted Functional Partners:
plu1805
Unnamed protein product; Similar to myo-inositol catabolism IolD of Bacillus subtilis; Belongs to the TPP enzyme family.
  
  
 0.694
plu1799
Unnamed protein product; Similar to myo-inositol catabolism iolB of Bacillus subtilis.
  
  
 0.629
plu1801
Unnamed protein product; Similar to myo-inositol catabolism protein IolC of Bacillus subtilis.
  
  
 0.613
plu0727
AP_endonuc_2 domain-containing protein; Unnamed protein product; Some similarities with D-tagatose 3-epimerase-related protein.
       0.598
plu1802
Unnamed protein product; Similar to oxidoreductase.
  
  
 0.475
plu1804
Unnamed protein product; Similar to myo-inositol dehydrogenase.
  
  
 0.475
plu2375
Unnamed protein product; Similar to hypothetical oxidoreductase YdgJ of Escherichia coli.
  
  
 0.475
plu3137
GFO_IDH_MocA domain-containing protein; Unnamed protein product; Some similarities with unknown protein.
  
  
 0.475
wblB
WblB protein; Similar to putative dehydrogenase.
  
  
 0.475
plu0725
Unnamed protein product; Hypothetical gene.
       0.464
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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