STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu0747Unnamed protein product; Weakly similar to unknown protein. (193 aa)    
Predicted Functional Partners:
plu0746
Unnamed protein product; Similar to unknown protein YgcL of Escherichia coli.
 
 
 0.997
plu0748
Unnamed protein product; Similar to unknown protein YgcJ of Escherichia coli.
 
 
 0.984
plu0749
Unnamed protein product; Similar to unknown protein and some similarities with unknown protein YgcI of Escherichia coli.
 
 
 0.980
plu0745
Unnamed protein product; Similar to unknown protein YgcB of Escherichia coli.
 
  
 0.971
plu0750
Unnamed protein product; Similar to unknown protein YgcH of Escherichia coli.
 
  
 0.883
plu4280
Unnamed protein product; Similar to Rhs-family protein.
  
     0.486
plu3577
DUF637 domain-containing protein; Unnamed protein product; Some similarities with hemagglutinin/hemolysin-related proteins. Putative transmembrane protein.
  
     0.431
plu3714
ZnF_CHCC domain-containing protein; Unnamed protein product; Highly similar to unknown protein of Photorhabdus and some similarities with DNA primase.
  
     0.423
plu3814
MFS domain-containing protein; Unnamed protein product; Similar to unknown protein.
  
     0.420
plu0544
ZnF_CHCC domain-containing protein; Unnamed protein product; Highly similar to unknown protein of Photorhabdus and some similarities with DNA primase.
  
     0.413
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.