Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
plu0756AMP-binding domain-containing protein; Unnamed protein product; Similar to enterobactin synthetase component F-related protein and other antibiotics synthetases. (521 aa)    
Predicted Functional Partners:
plu2321
Unnamed protein product; Similar to protein HMWP1 of Yersinia enterocolitica.
 
0.942
plu1885
PKS_KS domain-containing protein; Unnamed protein product; Similar to polyketide synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  0.934
plu1880
Unnamed protein product; Similar to proteins involved in antibiotic biosynthesis. Putative transmembrane protein.
 
0.846
plu0760
Unnamed protein product; Similar to probable acid--CoA ligase and gramicidin S synthase 2.
 
    
0.839
plu1212
Carrier domain-containing protein; Unnamed protein product; Some similarities with polyketide synthase PksC and mycosubtilin synthetase chain MycA. Putative transmembrane protein.
 0.814
plu0757
ACP_syn_III_C domain-containing protein; Unnamed protein product; Some similarities with 3-oxoacyl-acyl carrier protein synthase III. Protein involved in antibiotics synthetis.
       0.774
plu0758
Unnamed protein product; Similar to multidrug efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.773
plu0759
HlyD_D23 domain-containing protein; Unnamed protein product; Some similarities with multidrug efflux membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.773
plu0762
Unnamed protein product; Some similarities with acyl-Coenzyme A dehydrogenase.
 
  
 0.771
plu3919
Carrier domain-containing protein; Unnamed protein product; Some similarities with polyketide synthase and peptide synthetase.
 
 0.768
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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