Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
plu0795Unnamed protein product; Similar to phosphoglycolate phosphatase. (219 aa)    
Predicted Functional Partners:
hisA2
Unnamed protein product; Similar to phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase.
 
    0.813
plu0796
Pribosyltran domain-containing protein; Unnamed protein product; Unknown protein.
       0.779
plu2766
ATP-grasp domain-containing protein; Unnamed protein product; Weakly similar to putative ligase/carboxylase.
  
    0.530
moaA
Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
  
    0.509
plu2352
Chitin-binding type-4 domain-containing protein; Unnamed protein product; Similar to chitinase and chitin binding protein precursor.
  
     0.507
plu0244
Nudix hydrolase domain-containing protein; Unnamed protein product; Some similarities with mutator MutT protein homolog and NTP pyrophosphohydrolase; Belongs to the Nudix hydrolase family.
 
     0.497
plu0192
Unnamed protein product; Similar to unknown protein.
  
     0.487
purA1
Adenylosuccinate synthetase 1; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
  
    0.484
plu0793
Nudix hydrolase domain-containing protein; Unnamed protein product; Some similarities with MutT protein.
  
    0.471
plu3528
TauD domain-containing protein; Unnamed protein product; Some similarities with putative oxygenase and clavaminate synthase 1.
  
     0.464
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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