Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
afuCABC transporter ATP-binding protein AfuC; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system. (351 aa)    
Predicted Functional Partners:
afuB
Permease component of transport system for ferric iron, AfuB protein.
 
 0.995
afuA
Periplasmic ferric iron-binding protein AfuA.
 
 
 0.973
sapD
Peptide transport system ATP-binding protein SapD; Belongs to the ABC transporter superfamily.
 
    
0.848
mdlA
Multidrug resistance-like ATP-binding protein.
 
   
0.822
plu2318
Unnamed protein product; Similar to the lipoprotein inner membrane ABC-transporter Irp6 of Yersinia enterocolitica.
 
    
0.812
plu3125
Unnamed protein product; Similar to toxin secretion transporter.
     
0.777
ybhS
ABC transporter permease protein YbhS.
 
      0.762
rtxB
RTX toxin ABC transporter (IM-ABC) protein RtxB.
     
0.742
thiP
Thiamine transport system permease protein.
 
 
 0.680
plu1629
Lactamase_B domain-containing protein; Unnamed protein product; Similar to probable membrane protein YcaI of Escherichia coli.
     
 0.680
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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