STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
afuCABC transporter ATP-binding protein AfuC; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system. (351 aa)    
Predicted Functional Partners:
afuB
Permease component of transport system for ferric iron, AfuB protein.
 
 
 0.991
afuA
Periplasmic ferric iron-binding protein AfuA.
 
 
 0.976
sapD
Peptide transport system ATP-binding protein SapD; Belongs to the ABC transporter superfamily.
 
   
0.849
ybhS
ABC transporter permease protein YbhS.
 
   
  0.841
mdlA
Multidrug resistance-like ATP-binding protein.
 
   
0.823
plu2318
Unnamed protein product; Similar to the lipoprotein inner membrane ABC-transporter Irp6 of Yersinia enterocolitica.
 
    
0.813
plu3125
Unnamed protein product; Similar to toxin secretion transporter.
     
0.777
rtxB
RTX toxin ABC transporter (IM-ABC) protein RtxB.
     
0.742
cydC
Transport ATP-binding protein CydC.
 
    
0.666
modB
Molybdenum transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
  
 0.657
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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