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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uhpCRegulatory protein UhpC. (441 aa)    
Predicted Functional Partners:
afuA
Periplasmic ferric iron-binding protein AfuA.
 
  
 0.894
uhpB
Two-component sensor histidine kinase UhpB, phosphorylates UhpA.
 
  
 0.646
afuB
Permease component of transport system for ferric iron, AfuB protein.
 
    0.597
uhpA
Two-component response regulator. Hexose phosphate transport system regulatory protein UhpA.
     
 0.575
afuC
ABC transporter ATP-binding protein AfuC; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.
     
 0.522
plu3066
Unnamed protein product; Highly similar to tyrosine-specific transport system TyrP of Escherichia coli.
  
     0.454
plu1880
Unnamed protein product; Similar to proteins involved in antibiotic biosynthesis. Putative transmembrane protein.
  
  
 0.452
plu2340
Unnamed protein product; Highly similar to tyrosine-specific transport system TyrP of Escherichia coli.
  
     0.445
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.