STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uhpATwo-component response regulator. Hexose phosphate transport system regulatory protein UhpA. (210 aa)    
Predicted Functional Partners:
uhpB
Two-component sensor histidine kinase UhpB, phosphorylates UhpA.
 
 
 0.994
plu2041
Histidine kinase domain-containing protein; Unnamed protein product; Similar to nitrate/nitrite sensor protein NarX.
 
 
 0.827
arcB
Aerobic respiration control sensor protein.
 
 
 
 0.738
barA
Sensor protein BarA.
 
 
 
 0.670
uhpC
Regulatory protein UhpC.
     
 0.585
afuA
Periplasmic ferric iron-binding protein AfuA.
     
 0.575
bvgS
Virulence sensor protein BvgS precursor.
 
 
 0.565
plu4288
HTH luxR-type domain-containing protein; Unnamed protein product; Similar to LuxR family transcriptional regulators.
  
     0.478
rcsD
Phosphotransferase RcsD; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsD is a phosphotransfer intermediate between the sensor kinase RcsC and the response regulator RcsB. It acquires a phosphoryl group from RcsC and transfers it to RcsB.
 
 
 
 0.433
afuC
ABC transporter ATP-binding protein AfuC; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.
     
 0.419
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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