close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
agaSPutative tagatose-6-phosphate ketose/aldose isomerase. (407 aa)    
Predicted Functional Partners:
agaC
N-acetylgalactosamine PTS system EIIC component; Highly similar to PTS permease for mannose subunit IIPMan. Putative transmembrane protein.
 
  
 0.879
manX
PTS system, mannose-specific IIAB component (EIIAB-MAN) (Mannose-permease IIAB component) (Phosphotransferase enzyme II, AB component) (EIII-MAN).
 
  
 0.839
agaV
Highly similar to PTS system, cytoplasmic, N-acetylgalactosamine-specific.
 
  
 0.838
agaZ
Putative tagatose 6-phosphate kinase agaZ.
 
  
 0.837
agaD
N-acetylgalactosamine PTS system EIID component; Highly similar to putative phosphotransferase system enzyme subunit and to PTS permease for mannose subunit IIBMan. Putative transmembrane protein.
 
  
 0.836
plu0838
PTS EIIA type-4 domain-containing protein; Unnamed protein product; Similar to putative PTS system IIA component YadI of Escherichia coli.
 
  
 0.775
nagA
N-acetylglucosamine-6-phosphate deacetylase (GLCNAC 6-P deacetylase).
 
 
 0.746
manY
PTS system, mannose-specific IIC component (EIIC-MAN) (Mannose-permease IIC component) (Phosphotransferase enzyme II, C component) (EII-P-MAN).
 
  
 0.727
manZ
PTS system, mannose-specific IID component (EIID-MAN) (Mannose-permease IID component) (Phosphotransferase enzyme II, D component) (EII-M-MAN).
 
  
 0.700
pfkA
6-phosphofructokinase isozyme I (phosphofructokinase-1) (phosphohexokinase-1); Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
    
 0.520
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.