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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
agaDN-acetylgalactosamine PTS system EIID component; Highly similar to putative phosphotransferase system enzyme subunit and to PTS permease for mannose subunit IIBMan. Putative transmembrane protein. (297 aa)    
Predicted Functional Partners:
agaC
N-acetylgalactosamine PTS system EIIC component; Highly similar to PTS permease for mannose subunit IIPMan. Putative transmembrane protein.
 0.998
manX
PTS system, mannose-specific IIAB component (EIIAB-MAN) (Mannose-permease IIAB component) (Phosphotransferase enzyme II, AB component) (EIII-MAN).
 
 
 0.995
agaV
Highly similar to PTS system, cytoplasmic, N-acetylgalactosamine-specific.
 
 0.993
plu0838
PTS EIIA type-4 domain-containing protein; Unnamed protein product; Similar to putative PTS system IIA component YadI of Escherichia coli.
 
 0.993
manY
PTS system, mannose-specific IIC component (EIIC-MAN) (Mannose-permease IIC component) (Phosphotransferase enzyme II, C component) (EII-P-MAN).
 
 0.984
ptsH
Phosphocarrier protein HPr (Histidine-containing protein).
    
 0.907
agaS
Putative tagatose-6-phosphate ketose/aldose isomerase.
 
  
 0.836
fruA
PTS system, fructose-specific IIBC component.
   
  
 0.630
celA
PTS system, cellobiose-specific IIB component.
  
  
 0.576
agaZ
Putative tagatose 6-phosphate kinase agaZ.
 
    0.558
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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