STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu0895HTH cro/C1-type domain-containing protein; Unnamed protein product; Some similarities with transcriptional regulator, Cro/CI family. (117 aa)    
Predicted Functional Partners:
plu0896
Unnamed protein product; Similar to unknown protein.
 
 
 
 0.858
plu2423
Unnamed protein product; Similar to unknown protein.
 
 
 
 0.845
plu2422
HTH cro/C1-type domain-containing protein; Unnamed protein product; Similar to transcriptional regulator, Cro/CI family.
  
     0.697
plu2126
HipA_C domain-containing protein; Unnamed protein product; Some similarities with unknown protein.
 
 
 
 0.662
plu0894
Unnamed protein product; Similar to pyocin S3 immunity protein.
       0.495
plu1341
Peptidase C80 domain-containing protein; Truncated gene. Highly similar to C-terminal region of RTX toxin RtxA.
  
     0.485
plu3324
Peptidase C80 domain-containing protein; Unnamed protein product; Similar to RTX toxin RtxA.
  
     0.470
plu3217
Peptidase C80 domain-containing protein; Unnamed protein product; Similar to RTX toxin RtxA.
  
     0.459
plu1344
Peptidase C80 domain-containing protein; Truncated gene. Similar to C-terminal region of RTX toxin RtxA.
  
     0.429
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.