Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
plu0927Unnamed protein product; Similar to MFS transporter. (390 aa)    
Predicted Functional Partners:
plu2199
MFS domain-containing protein; Unnamed protein product; Similar to transporter.
  
     0.768
emrB
Multidrug resistance protein B; Belongs to the major facilitator superfamily.
  
     0.744
plu3924
Unnamed protein product; Similar to probable MFS transporter.
  
     0.737
plu0061
MFS domain-containing protein; Unnamed protein product; Highly similar to hypothetical transport protein YieO of Escherichia coli; Belongs to the major facilitator superfamily.
  
     0.713
plu1505
MFS domain-containing protein; Unnamed protein product; Some similarities with bicyclomycin resistance protein and multidrug resistance protein D.
  
     0.710
plu4255
MFS domain-containing protein; Unnamed protein product; Similar to bicyclomycin resistance protein Bcr (sulfonamide resistance protein).
  
     0.647
plu0985
Bcr/CflA family efflux transporter; Unnamed protein product; Some similarities with probable MFS transporter.
  
     0.573
plu4084
Bcr/CflA family efflux transporter; Unnamed protein product; Similar to putative transport protein and multidrug resistance protein like bicyclomycin resistance protein.
  
     0.568
plu0472
Bcr/CflA family efflux transporter; Unnamed protein product; Similar to multidrug resistance proteins.
  
     0.513
plu4679
Biotin_lipoyl_2 domain-containing protein; Unnamed protein product; Similar to multidrug resistance protein A.
  
   0.492
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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