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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu0930Fe2OG dioxygenase domain-containing protein; Unnamed protein product; Highly similar to unknown protein of Photorhabdus and some weak similarities with dioxygenase; Belongs to the iron/ascorbate-dependent oxidoreductase family. (310 aa)    
Predicted Functional Partners:
plu0936
Thymidylate_kin domain-containing protein; Unnamed protein product; Some similarities with thymidylate kinase.
  
     0.727
plu3528
TauD domain-containing protein; Unnamed protein product; Some similarities with putative oxygenase and clavaminate synthase 1.
  
     0.547
plu0449
CTP_transf_like domain-containing protein; Unnamed protein product; Some similarities with unknown protein.
  
     0.525
plu4187
Unnamed protein product; Some similarities with cyclase/dehydrase/aromatase.
  
     0.428
pdl
Pdl protein; Similar to putative lipase of Photorhabdus luminescens, strain W14.
  
     0.423
pulA
Alpha-dextrin endo-1,6-alpha-glucosidase precursor (pullulanase precursor); Belongs to the glycosyl hydrolase 13 family.
  
     0.414
cdd
Cytidine deaminase (Cytidine aminohydrolase) (CDA); This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis.
 
     0.406
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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