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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu0949HTH tetR-type domain-containing protein; Unnamed protein product; Similar to transcriptional regulator. (197 aa)    
Predicted Functional Partners:
plu0948
HTH marR-type domain-containing protein; Unnamed protein product; Similar to transcriptional regulator.
 
   
 0.612
plu3044
CMD domain-containing protein; Unnamed protein product; Similar to unknown protein.
 
   
 0.601
plu2425
HTH tetR-type domain-containing protein; Unnamed protein product; Similar to transcriptional regulator.
  
  
 0.550
plu0950
FAD-binding PCMH-type domain-containing protein; Unnamed protein product; Some similarities with eugenol hydroxylase flavoprotein subunit.
       0.501
plu2643
Unnamed protein product; Similar to probable MFS transporter.
 
     0.442
plu0951
Formyl_trans_C domain-containing protein; Unnamed protein product; Hypothetical protein.
       0.430
plu0952
Cupin_2 domain-containing protein; Unnamed protein product; Some similarities with unknown protein.
       0.427
plu2321
Unnamed protein product; Similar to protein HMWP1 of Yersinia enterocolitica.
   
 
 0.409
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.