Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
tcdA2Insecticidal toxin complex protein TcdA2. (2444 aa)    
Predicted Functional Partners:
tcdB2
Insecticidal toxin complex protein TcdB2.
 
 
 0.964
tccC3
Insecticidal toxin complex protein TccC3.
 
 
 0.935
tcaC
Highly similar to insecticidal toxin complex protein TcaC of W14.
 
 
 0.907
tcdB1
Highly similar to insecticidal toxin complex protein TcdB.
 
 
 0.907
tccC2
Insecticidal toxin complex protein TccC2.
 
 
 0.903
tccC5
Insecticidal toxin complex protein TccC5.
 
 
 0.903
tccC4
Insecticidal toxin complex protein TccC4.
 
   0.799
tccC1
Insecticidal toxin complex protein TccC1; Truncated gene. Highly similar to the C-terminal region of insecticidal toxin complex protein TccZ, disruption of the gene tccZ in TT01 genome compared to W14.
 
   0.799
tccC6
Insecticidal toxin complex protein TccC6.
 
   0.799
tccC7
Insecticidal toxin complex protein TccC7.
 
   0.799
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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