STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tccC4Insecticidal toxin complex protein TccC4. (959 aa)    
Predicted Functional Partners:
tcdB1
Highly similar to insecticidal toxin complex protein TcdB.
 
 
   0.887
tcaC
Highly similar to insecticidal toxin complex protein TcaC of W14.
 
 
   0.885
tcdB2
Insecticidal toxin complex protein TcdB2.
 
 
   0.878
tcdA1
Highly similar to insecticidal toxin complex protein TcdA (toxin A).
  
   0.809
tcdA4
Insecticidal toxin complex protein TcdA4.
  
   0.809
tcdA2
Insecticidal toxin complex protein TcdA2.
  
   0.809
tcdA5
Insecticidal toxin complex protein TcdA5.
  
   0.809
tccB2
Insecticidal toxin complex protein TccB2.
  
   0.809
tccB3
Insecticidal toxin complex protein TccB3.
  
   0.808
tccB1
Highly similar to insecticidal toxin complex protein TccB of W14 Putative transmembrane protein.
  
   0.808
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.