STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
plu1004TauD domain-containing protein; Unnamed protein product; Similar to alpha-ketoglutarate-dependent taurine dioxygenase (2-aminoethanesulfonate dioxygenase). (315 aa)    
Predicted Functional Partners:
plu1003
MFS domain-containing protein; Unnamed protein product; Weakly similar to cyanate transport protein.
       0.714
plu1005
MFS domain-containing protein; Unnamed protein product; Similar to 4-hydroxybenzoate transporter PcaK.
       0.603
plu1000
Rieske domain-containing protein; Unnamed protein product; Similar to salicylate-5-hydroxylase large oxygenase component.
 
     0.556
plu2321
Unnamed protein product; Similar to protein HMWP1 of Yersinia enterocolitica.
 
  
 0.552
plu1880
Unnamed protein product; Similar to proteins involved in antibiotic biosynthesis. Putative transmembrane protein.
 
  
 0.548
plu1002
Unnamed protein product; Similar to hypothetical proteins, bile acid-inducible operon protein F, racemase and putative dehydratase; Belongs to the CoA-transferase III family.
 
     0.542
plu3815
Bac_luciferase domain-containing protein; Unnamed protein product; Similar to putative monooxygenase YcdM of Escherichia coli.
 
    0.518
plu2193
TauD domain-containing protein; Unnamed protein product; Weakly similar to hypothetical gamma-butyrobetaine,2-oxoglutarate.
  
     0.497
plu4232
Unnamed protein product; Similar to monooxygenase.
  
     0.472
plu2185
Unnamed protein product; Some weak similarities with unknown proteins. Putative transmembrane protein.
  
     0.456
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.