Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
IS_Pl3_3Similar to hypothetical proteins encoded in ISEc8. (501 aa)    
Predicted Functional Partners:
plu1060
Unnamed protein product; Similar to unknown protein in ISEc8.
 
     0.903
ISplu12A-2
Transposase, IS66 family; Unnamed protein product; Highly similar to unknown protein encoded by ISEc8.
 
     0.777
plu3114
Unnamed protein product; Similar to unknown protein in ISEc8.
 
     0.777
plu3257
Unnamed protein product; Similar to unknown protein in ISEc8.
 
     0.777
ISplu12A
Transposase, IS66 family.
 
     0.777
plu1062
Unnamed protein product; Some similarities with unknown protein.
       0.664
plu1059
Unnamed protein product; Similar to unknown protein of Escherichia coli O157:H7.
       0.588
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.