Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
plu1174Fe/B12 periplasmic-binding domain-containing protein; Unnamed protein product; Similar to siderophore uptake periplasmic binding protein. (316 aa)    
Predicted Functional Partners:
fepB
Ferric enterobactin binding periplasmic protein precursor FepB.
  
  
 0.602
fecB
Iron(III) dicitrate-binding periplasmic protein precursor FecB.
  
  
0.549
fecE
Iron(III) dicitrate transport ATP-binding protein FecE.
 
  
 0.535
plu1173
Unnamed protein product; Highly similar to unknown protein YggN of Escherichia coli.
       0.519
fepC
Ferric enterobactin transport ATP-binding protein FepC.
 
  
 0.511
plu1458
Unnamed protein product; Similar to streptomycin adenyltransferase.
  
     0.496
plu2040
FAD-binding FR-type domain-containing protein; Unnamed protein product; Similar to vibriobactin utilization protein ViuB.
 
  
 0.452
glsA
Glutaminase; Unnamed protein product; Highly similar to probable glutaminase YneH of Escherichia coli; Belongs to the glutaminase family.
       0.447
plu0798
Unnamed protein product; Similar to efflux pump.
  
   
 0.409
fepG
Ferric enterobactin transport system permease protein FepG; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
    0.400
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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