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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu1174Fe/B12 periplasmic-binding domain-containing protein; Unnamed protein product; Similar to siderophore uptake periplasmic binding protein. (316 aa)    
Predicted Functional Partners:
fepB
Ferric enterobactin binding periplasmic protein precursor FepB.
  
  
 0.611
fecE
Iron(III) dicitrate transport ATP-binding protein FecE.
 
  
 0.571
fecB
Iron(III) dicitrate-binding periplasmic protein precursor FecB.
  
  
0.567
fepC
Ferric enterobactin transport ATP-binding protein FepC.
 
  
 0.549
plu1173
Unnamed protein product; Highly similar to unknown protein YggN of Escherichia coli.
       0.519
plu1458
Unnamed protein product; Similar to streptomycin adenyltransferase.
  
     0.496
glsA
Glutaminase; Unnamed protein product; Highly similar to probable glutaminase YneH of Escherichia coli; Belongs to the glutaminase family.
       0.444
plu2040
FAD-binding FR-type domain-containing protein; Unnamed protein product; Similar to vibriobactin utilization protein ViuB.
 
  
 0.429
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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