Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
proWGlycine betaine/L-proline transport system permease protein proW. (361 aa)    
Predicted Functional Partners:
proV
Glycine betaine/L-proline transport ATP-binding protein proV.
 
 0.999
proX
Glycine betaine-binding periplasmic protein precursor ProX.
 
 0.998
malF
Maltose transport inner membrane protein; Part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import. Probably responsible for the translocation of the substrate across the membrane.
     
 0.568
malK
Maltose/maltodextrin transport ATP-binding protein MalK; Part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Maltooligosaccharide importer (TC 3.A.1.1.1) family.
     
 0.551
malE
Periplasmic maltose-binding protein precursor; Part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import. Binds maltose and higher maltodextrins. Belongs to the bacterial solute-binding protein 1 family.
     
  0.540
plu3849
Putative ABC transporter ATP-binding protein plu3849; Probably part of an ABC transporter complex. Responsible for energy coupling to the transport system (By similarity).
     
  0.540
plu4479
Unnamed protein product; Highly similar to putative membrane protein YjgQ of Escherichia coli.
     
  0.540
plu4480
Unnamed protein product; Highly similar to putative membrane protein YjgP of Escherichia coli.
     
  0.540
znuB
High-affinity zinc uptake system membrane protein ZnuB.
  
  
 0.497
artM
Arginine transport system permease protein artM.
  
  
  0.457
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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