STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu1322FAD_binding_3 domain-containing protein; Unnamed protein product; Similar to 2.4-dihydroxybenzoate monooxygenase. (555 aa)    
Predicted Functional Partners:
plu2236
FAD_binding_3 domain-containing protein; Unnamed protein product; Some similarities with probable monooxygenase.
  
   
 0.750
plu1743
FAD_binding_3 domain-containing protein; Unnamed protein product; Similar to putative monooxygenase.
  
   
 0.738
plu1219
Unnamed protein product; Similar to Sim-nI, NovI and KikQ (cytochromes P-450), proteins involved in antibiotic biosynthesis.
  
 
 0.632
plu2351
NAD(P)-bd_dom domain-containing protein; Unnamed protein product; Similar to unknown protein.
  
  
 0.590
tRNA-Pro
tRNA-Pro; tRNAscan-SE vs 1.3 result - Cove score = 92.73; Belongs to the cytochrome P450 family.
  
 
 0.580
plu4186
Unnamed protein product; Weakly similar to unknown protein; Belongs to the UPF0255 family.
 
     0.577
plu1000
Rieske domain-containing protein; Unnamed protein product; Similar to salicylate-5-hydroxylase large oxygenase component.
  
  
 0.521
plu1866
Bac_luciferase domain-containing protein; Unnamed protein product; Highly similar to nitrilotriacetate monooxygenase component A.
  
     0.519
hcaE
3-phenylpropionate dioxygenase alpha subunit (digoxigenin alpha subunit); Part of the multicomponent 3-phenylpropionate dioxygenase. Converts 3-phenylpropionic acid (PP) and cinnamic acid (CI) into 3- phenylpropionate-dihydrodiol (PP-dihydrodiol) and cinnamic acid- dihydrodiol (CI-dihydrodiol), respectively.
  
  
 0.511
plu4298
HD_domain domain-containing protein; Unnamed protein product; Similar to unknown protein and some similarities with cyanamide hydratase.
  
     0.508
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.