close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu1330HTH araC/xylS-type domain-containing protein; Unnamed protein product; Similar to AraC-family transcriptional regulator. (268 aa)    
Predicted Functional Partners:
plu3775
HTH araC/xylS-type domain-containing protein; Unnamed protein product; Similar to the transcriptional activator protein ExsA/VirF.
  
   0.689
plu1810
HTH araC/xylS-type domain-containing protein; Unnamed protein product; Similar to transcription regulator.
 
 
 0.681
plu2638
HTH araC/xylS-type domain-containing protein; Unnamed protein product; Similar to transcriptional regulator (AraC/XylS family).
  
   0.675
plu2787
HTH araC/xylS-type domain-containing protein; Unnamed protein product; Similar to AraC-family transcriptional regulatory protein.
  
   0.653
plu0634
Unnamed protein product; Similar to toxin secretion ATP-binding protein.
      
 0.520
plu3217
Peptidase C80 domain-containing protein; Unnamed protein product; Similar to RTX toxin RtxA.
      
 0.520
plu3324
Peptidase C80 domain-containing protein; Unnamed protein product; Similar to RTX toxin RtxA.
      
 0.520
plu4117
Unnamed protein product; Similar to unknown protein of Photorhabdus and some similarities with Fe-regulated RTX cytotoxin and hemolysin-type calcium binding protein.
      
 0.520
plu1329
RHH_1 domain-containing protein; Unnamed protein product; Highly similar to unknown protein YbfE of Escherichia coli.
       0.486
rob
Right origin-binding protein.
 
   0.481
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.