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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu1423Unnamed protein product; Similar to unknown protein YbfA of Escherichia coli. (69 aa)    
Predicted Functional Partners:
plu1242
UPF0255 protein plu1242; Unnamed protein product; Similar to unknown protein YafA of Escherichia coli; Belongs to the UPF0255 family.
  
     0.761
plu4737
Unnamed protein product; Similar to unknown protein YijD of Escherichia coli.
  
     0.761
wzzE
Lipopolysaccharide biosynthesis protein WzzE; Modulates the polysaccharide chain length of enterobacterial common antigen (ECA); Belongs to the WzzB/Cld/Rol family.
  
     0.759
plu2088
Unnamed protein product; Similar to putative lipoprotein YceB of Escherichia coli.
  
     0.757
plu4770
Unnamed protein product; Similar to putative membrane protein YiiR of Escherichia coli.
  
     0.737
plu1386
Unnamed protein product; Similar to putative lipoprotein precursor YfeY protein of Escherichia coli.
  
     0.726
plu2865
Unnamed protein product; Similar to unknown protein yejG of Escherichia coli.
  
   
 0.725
plu1173
Unnamed protein product; Highly similar to unknown protein YggN of Escherichia coli.
  
     0.723
plu2677
Unnamed protein product; Similar to probable membrane protein YniB of Escherichia coli.
  
     0.709
plu1583
Unnamed protein product; Similar to putative sensory transduction regulator YbjN of Escherichia coli.
  
     0.698
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.