Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
plu1435Aminotran_5 domain-containing protein; Unnamed protein product; Some similarities with aminotransferase. Putative transmembrane protein. (380 aa)    
Predicted Functional Partners:
sufC
Probable ATP-dependent transporter SufC.
 
  
 0.840
plu1434
Unnamed protein product; Some similarities with putative oxidoreductase.
 
     0.822
sufB
SufB protein.
 
 
 0.779
nifU
NifU protein; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters.
  
 
 0.741
plu4673
NifU_N domain-containing protein; Unnamed protein product; Some similarities with nitrogen fixation proteins.
  
 
 0.741
sufD
SufD protein.
 
 
 0.736
plu1436
Unnamed protein product; Hypothetical protein.
       0.666
plu1437
FAD_binding_3 domain-containing protein; Unnamed protein product; Similar to 3-(3-hydroxy-phenyl) propionate hydroxylase MphA protein of Escherichia coli.
       0.649
plu1439
Unnamed protein product; Similar to unknown protein.
 
    0.499
plu0448
Aminotran_5 domain-containing protein; Unnamed protein product; Similar to Nifs family aminotransferase.
  
     0.473
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.