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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu1439Unnamed protein product; Similar to unknown protein. (249 aa)    
Predicted Functional Partners:
plu1440
ATP-grasp domain-containing protein; Unnamed protein product; Some similarities with putative ligase/carboxylase.
 
     0.735
plu1438
Unnamed protein product; Similar to branched-chain amino acid aminotransferases.
       0.730
plu1434
Unnamed protein product; Some similarities with putative oxidoreductase.
 
  
 0.700
plu1436
Unnamed protein product; Hypothetical protein.
  
  
 0.668
plu0952
Cupin_2 domain-containing protein; Unnamed protein product; Some similarities with unknown protein.
 
    0.558
plu1437
FAD_binding_3 domain-containing protein; Unnamed protein product; Similar to 3-(3-hydroxy-phenyl) propionate hydroxylase MphA protein of Escherichia coli.
 
     0.524
plu1435
Aminotran_5 domain-containing protein; Unnamed protein product; Some similarities with aminotransferase. Putative transmembrane protein.
 
    0.501
luxB
Alkanal monooxygenase beta chain (luciferase beta subunit); Light-emitting reaction in luminous bacteria. The specific role of the beta subunit is unknown, but it is absolutely required for bioluminescence activity.
  
     0.451
ppxB
Photopexin B.
  
     0.411
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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