STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu1472Unnamed protein product; Similar to putative membrane protein. (275 aa)    
Predicted Functional Partners:
plu1615
Unnamed protein product; Similar to unknown protein YcaO of Escherichia coli.
  
  
 0.743
phlA
Hemolysin PhlA.
  
     0.629
phlB
PhlA hemolysin secretion/activation protein PhlB.
  
     0.595
plu2552
Unnamed protein product; Similar to putative nitroreductase YdjA of Escherichia coli.
  
  
 0.562
gpmA
Phosphoglycerate mutase 1 (phosphoglyceromutase 1) (PGAM 1); Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.
       0.503
plu1374
TPR_REGION domain-containing protein; Unnamed protein product; Weakly similar to putative fimbrial biogenesis and twitching motility protein. Putative transmembrane secreted protein.
  
     0.498
plu3966
Unnamed protein product; Similar to putative lipoprotein.
  
     0.496
plu1542
MFS_4 domain-containing protein; Unnamed protein product; Similar to putative transport protein YjiJ of Escherichia coli.
 
     0.494
flgM
Negative regulator of flagellin synthesis (Anti-sigma-28 factor) FlgM.
  
     0.487
plu3965
Unnamed protein product; Similar to putative lipoprotein.
  
     0.472
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.