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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu1483RES domain-containing protein; Unnamed protein product; Hypothetical gene. (221 aa)    
Predicted Functional Partners:
plu1482
DUF2384 domain-containing protein; Unnamed protein product; Hypothetical gene.
 
     0.800
plu0922
HTH luxR-type domain-containing protein; Unnamed protein product; Weakly similar to transcriptional regulator, LuxR family.
  
     0.686
plu3221
HTH luxR-type domain-containing protein; Unnamed protein product; Similar to probable transcription regulator, LuxR family.
  
     0.664
plu3720
HTH luxR-type domain-containing protein; Unnamed protein product; Similar to transcriptional regulator LuxR family.
  
     0.646
plu3227
DUF2235 domain-containing protein; Unnamed protein product; Similar to unknown protein.
  
     0.601
plu3241
DUF2235 domain-containing protein; Unnamed protein product; Similar to unknown protein.
  
     0.596
plu4198
Unnamed protein product; Similar to unknown protein.
  
     0.583
plu2003
HTH luxR-type domain-containing protein; Unnamed protein product; Similar to transcriptional regulator, LuxR family.
  
     0.582
plu3220
HTH luxR-type domain-containing protein; Unnamed protein product; Similar to probable transcription regulator, LuxR family.
  
     0.571
plu2011
HTH luxR-type domain-containing protein; Unnamed protein product; Weakly similar to transcriptional regulator, LuxR family.
  
     0.570
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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