STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
plu1503Unnamed protein product; Highly similar to hypothetical integral membrane protein YbhL of Escherichia coli; Belongs to the BI1 family. (236 aa)    
Predicted Functional Partners:
moaE
Molybdopterin [MPT] converting factor, subunit 2 (molybdenum cofactor biosynthesis protein E) (molybdopterin converting factor large subunit).
       0.536
htpX
Protease HtpX (heat shock protein); Belongs to the peptidase M48B family.
  
  
 0.471
hflK
Protease specific for phage lambda cII repressor; HflC and HflK could encode or regulate a protease.
  
   
 0.471
hflC
Lambda CII stability-governing protein HflC; HflC and HflK could regulate a protease.
  
  
 0.410
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
       0.401
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.