STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ybhSABC transporter permease protein YbhS. (386 aa)    
Predicted Functional Partners:
ybhF
ABC transporter ATP-binding protein YbhF.
  
 0.996
ybhG
Membrane Fusion Protein (MFP) YbhG.
 
  
 0.954
yadG
ABC transporter ATP-binding protein YadG.
 
  
 0.916
ybhR
ABC transporter permease protein YbhR.
 
  
 
0.894
yhbG
Probable ABC transporter ATP-binding protein yhbG.
   
  0.878
plu1510
HTH tetR-type domain-containing protein; Unnamed protein product; Similar to putative transcriptional regulator, TetR family, YbiH of Escherichia coli.
 
  
 0.846
afuC
ABC transporter ATP-binding protein AfuC; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.
 
   
  0.841
livG
High-affinity branched-chain amino acid transport ATP-binding protein LivG.
 
      0.755
metN
D-methionine transport ATP-binding protein MetN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
      0.750
plu4516
Unnamed protein product; Highly similar to membrane fusion protein (MFP) of ABC transport system.
 
  
 0.614
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.